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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs7039651 chr9:36031317 G/A 9.14E-6 471 15.8 15.08 17.93 KM Plot
THCA rs706971 chr6:119129343 A/C 0.000266 484 16.23 14.27 21.77 KM Plot
THCA rs7073497 chr10:100153688 C/T 5.19E-6 487 15.97 16.15 13.07 KM Plot
THCA rs707602 chr15:63363737 A/G 6.04E-12 490 15.5 16.67 16.63 KM Plot
THCA rs7076185 chr10:90923524 G/A 0.000311 482 15.33 17.85 14.47 KM Plot
THCA rs7083328 chr10:104769268 G/A 5.04E-9 490 15.2 17.73 32.1 KM Plot
THCA rs7083964 chr10:81781851 G/T 2.87E-5 490 16.38 15.68 9.28 KM Plot
THCA rs7084472 chr10:104661997 C/T 2.87E-8 489 15.33 17.33 19.1 KM Plot
THCA rs7091084 chr10:88721024 C/T 0.000262 486 15.07 17.03 12.58 KM Plot
THCA rs7099987 chr10:104807926 C/T 5.02E-9 490 15.23 17.68 32.1 KM Plot
THCA rs7100592 chr10:104769098 T/G 5.04E-9 490 15.2 17.73 32.1 KM Plot
THCA rs71014910 chr7:44964843 AACACACACACACACAC/A 7.69E-5 479 7.07 16.67 15.7 KM Plot
THCA rs7102434 chr11:62607068 A/G 7.55E-5 490 16.22 14.33 14.27 KM Plot
THCA rs710248 chr1:41574622 C/T 6.07E-12 489 17.47 17.77 14.93 KM Plot
THCA rs7104794 chr11:73538698 A/C 8.71E-6 490 16.37 15 9.95 KM Plot